BMT-53007 Computational Diagnostics, 5 cr

Implementation BMT-53007 2017-01

Description

After completing the course, the student gained a basic understanding of the definition and the meaning of computational diagnostics and its utility for biomedical research. Case studies will be discussed illustrating the interplay between computational and statistical methods that are applied to large-scale and high-dimensional data sets from genomic and genetic experiments. Moreover, the student will learn how to practically approach such problems by using the statistical programming language R. In general, the course teaches statistical thinking in the context of biomedical problems, i.e., the adaptation of machine learning methods in a problem specific manner.

Lessons

Period 1
Methods of instruction Luento, Tentti
Person responsible Frank Emmert-Streib

Assessment scale

Numerical evaluation scale (0-5)

Requirements

To complete the course, the student is required to (all three requirements must be completed to pass the course):
a) Execute the project work (20% of the final grade)
b) Execute the weekly exercises (1 per exercises lesson, 40% of the final grade)
c) Do the final exam (40% of the final grade)

Exam Mon 16.10.2017 09:00 - 12:00
Exam Thu 30.11.2017 17:00 - 20:00
Exam Wed 17.01.2018 17:00 - 20:00
BMT-53007 Computational Diagnostics/Lec/01 Wed 30.08.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/02 Thu 31.08.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/01 Wed 06.09.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/02 Thu 07.09.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/01 Wed 13.09.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/02 Thu 14.09.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/01 Wed 20.09.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/02 Thu 21.09.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/01 Wed 27.09.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/02 Thu 28.09.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/01 Wed 04.10.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/02 Thu 05.10.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/01 Wed 11.10.2017 12:00 - 14:00
BMT-53007 Computational Diagnostics/Lec/02 Thu 12.10.2017 12:00 - 14:00

Study material

Type Name Author ISBN Additional information Language Examination material
Book An Introduction to Statistical Learning Gareth James, Daniela Witten, Trevor Hastie and Robert Tibshirani Introductory overview of many methods discussed in the lectures. English No
Book Statistics and Data Analysis for Microarrays Using R and Bioconductor Sorin Drăghici Introduction to the analysis of microarray data. English No