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Archived Curricula Guide 2012–2013
Curricula Guide is archieved. Please refer to current Curricula Guides
BIOI4200 Expression Data Analysis 4 ECTS
Organised by
Bioinformatics
Person in charge
Mauno Vihinen
Preceding studies
Recommended:
Corresponding course units in the curriculum
Institute of Biomedical Technology
Curricula 2011 – 2012
BIOI4200 Expression Data Analysis 4 ECTS

Learning outcomes

The goal of this course is to introduce statistical concepts and tools to analyze expression data. The expression data will be analyzed using the R language.

Contents

Introduction to the microarray technology; Introduction to data analysis with R; Primary (or “low-level") analysis of data; Dimension reduction, clustering & visualization; Promoter identification & microarray annotation; Integrated analyses: BioOntologies & reverse engineering; Bioconductor packages and expression data analysis.

Teaching methods

Teaching method Contact Online
Lectures 20 h 0 h

Lectures (appr.20 h) and practical training, Journal club.

Teaching language

English

Modes of study

Option 1
Available for:
  • Degree Programme Students
  • Other Students
  • Open University Students
  • Doctoral Students
  • Exchange Students
Participation in course work 
In English

Lectures (approx.20 h), Practical training, Journal Club

Evaluation

Numeric 1-5.

Study materials

eBook (http://www.csc.fi/csc/julkaisut/oppaat/arraybook_overview)

Further information

Not available any longer.

You cannot include both BIOI4200 and BIOI4201 for credit in your degree.

Belongs to following study modules

Institute of Biomedical Technology
Systems biology/Data analysis
2012–2013
Teaching
Archived Teaching Schedule. Please refer to current Teaching Shedule.
-
Institute of Biomedical Technology
Degree Programmes